Syed Lokman

Educator | Researcher | Creator

About Me

Hi There!

Welcome to my personal website! This site serves as a gateway to all of my projects. I plan to add detailed instructions for my projects once they are completed.

I have a strong interest in Molecular Biology and am particularly interested in using computational techniques to study molecular mechanisms that would otherwise be time-consuming and tedious. I am excited to see the role that AI plays in this field, with companies like Google (AlphaFold) and Meta (ESMFold) already making a mark.

Thank you for visiting my website and please check back for updates.

Visit My Course Page: https://course.syedlokman.com

Resume

Experience

Education

Volunteering

Extracurriculars

Certifications

Experience

Asian University for Women

Instructor - Bioinformatics

(2022-Present)

BAF Shaheen College Chattogram

Lecturer - Biology

(2021)

DBME Research Group

Research Assistant

(2018-2020)

NIPS, Japan

Research Intern, Homeostatic Development Lab

(2018)

Education

University of Chittagong

Genetic Engineering & Biotechnology

Master of Science (2021)

University of Chittagong

Genetic Engineering & Biotechnology

Bachelor of Science (2015- 2019)

Govt Hazi Mohammad Mohsin College

HSC - Science

Chattogram Govt High School

SSC - Science

Volunteering

Cancer Care and Research Trust (CCRT) Bangladesh

Founding Member and Media & Promotions Co-Lead | 2018-2021

Bangladesh Institute of Tropical and Infectious Diseases Hospital

Volunteer Molecular Biologist for COVID-19 | 2020

Bangladesh Biology Olympiad

Regional Olympiad Organizer & Lead Volunteer | 2016-2019

10 Minute School (https://10ms.com)

SmartBook Creator | 2018

Extracurriculars

Participated in “Drishty Brainstorming Challenge” organized by Drishty Chittagong (2018)
Acted as IT Coordinator at GEB Festival organized by GEBCU, Chittagong (2018)
Designed the book cover of “Gene Mon Valobasha" by Mustak Ibn Ayub (2018)
Volunteered Tree Plantation Program at CU, Chittagong (2017)
Organized 1st DNA DAY 2016 at GEBCU, Chittagong (2016)

Certifications

Coursera: “Whole Genome Sequencing of Bacterial Genomes” by Technical University of Denmark.
Coursera: “Bioinformatic Methods I” by University of Toronto.
Coursera: “The Data Scientist’s Toolbox” by Johns Hopkins University.
Coursera: “Introduction to Genomic Technologies” by Johns Hopkins University.
FutureLearn: “Disease Outbreaks and Antimicrobial Resistance” by Wellcome Sanger Institute.
“Structure Based Drug Design” by Molecular Modeling and Drug Design Laboratory (BCSIR).
“Data Sciences and Genome Sequencing: Computational Approaches” by DBME Research Group.

Skills

Molecular and Computational Skills

DNA Extraction (PCI Method), PCR, qRT-PCR, Electrophoresis

Sequence Analysis: BLAST, MEGA, BioEdit, MSA & Tree Construction

Computational Analysis: PSI-BLAST, Selection (Ka/ks), Cytoscape

Analytical: UV Spec, ELISA, HPLC, NanoDrop, TLC, AAS

Microbiological: Bacterial Culture, Replica Plating, GLP, BOD, MPN Test

Protein Modeling: MODELLER, GROMACS, PyMol, BlastP

UNIX/ Bash, Git & Github

R: Deseq2, BioConductor, ggplot2

AI/ML: Scikit Learn

Python: Pandas, Numpy, Matplotlib, Seaboarn, Plotly

Portfolio

Glimps of My Works

BDBO: Biology Olympiad 2019

BDBO: Biology Olympiad 2019

Biotechnology Festival 2019

Biotechnology Festival 2019

The genomic and proteomic variations of SARS-CoV-2 spike glycoprotein

DNA Day 2016

The genomic and proteomic variations of SARS-CoV-2 spike glycoprotein

My Video Projects in a Nutshell.

My Video Projects in a Nutshell.

Gaussian: The Molecular Optimization and Frequency Calculation

Gaussian: The Molecular Optimization and Frequency Calculation

A Tale of An Assignment

A Tale of An Assignment

BDBO: Biology Olympiad 2019

BDBO: Biology Olympiad 2019

Result Analysis: Gaussian

Result Analysis: Gaussian

Protein Preparation and Optimization

Protein Preparation and Optimization

Women in Research S1

Women in Research S1

BDBO: Biology Olympiad 2019

BDBO: Biology Olympiad 2019

Molecular Docking and Visualization

Molecular Docking and Visualization

Multiple Sequence Alignment | Clustal Omega | Beginner

Multiple Sequence Alignment | Clustal Omega | Beginner

Three Minute Thesis - Bangladesh Region | 2019

Three Minute Thesis - Bangladesh Region | 2019

Drug Design Project on Quantum Computation and Molecular Docking

Drug Design Project on Quantum Computation and Molecular Docking

BDBO: Biology Olympiad 2019

BDBO: Biology Olympiad 2019

BDBO: Biology Olympiad 2019

BDBO: Biology Olympiad 2019

Gout - 7 Minute Presentation

Gout - 7 Minute Presentation

Trash2Craft | Hult Prize at University of Chittagong | 2019

Trash2Craft | Hult Prize at University of Chittagong | 2019

GuideBD

Nobel Prize Talk S1

Nobel Prize Talk S1

Drishty BTS: Discovery S1

Drishty BTS: Discovery S1

BD Dr Info

SmaartPhone.com

SmaartPhone.com

BDBO: Biology Olympiad 2019

BDBO: Biology Olympiad 2019

COVID-19 Awareness Poster

CCRT BD

Syed Lokman

Book Cover: Genetic Engineering & Agriculture

Book Cover: Genetic Engineering & Agriculture

Book Cover: Gene Mon Valobasha

Book Cover: Gene Mon Valobasha

Major Insights in Dynamics of Host Response to SARS-CoV-2

Biotechnology Festival 2019

Biotechnology Festival 2019

GEB Festival 2018

GEB Festival 2018

Ongoing Projects

Things I am Building for Next 50 Years

CADD 101

CADD 101

Computer Aided Drug Design

This is an UPCOMING Project!

EDA FUN

EDA FUN

Exploratory Data Analysis

This is an UPCOMING Project!

XOPERON

XOPERON

Molecular Biology Courses

This is an UPCOMING Project!

OPERONio

OPERONio

Bioinformatics with Programming

This is an UPCOMING Project!

Say Hi

Here i am

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